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1.
J Med Primatol ; 51(4): 234-245, 2022 08.
Article Dans Anglais | MEDLINE | ID: covidwho-1794630

Résumé

In efforts to increase rigor and reproducibility, the USA National Primate Research Centers (NPRCs) have focused on qualification of reagents, cross-laboratory validations, and proficiency testing for methods to detect infectious agents and accompanying immune responses in nonhuman primates. The pathogen detection working group, comprised of laboratory scientists, colony managers, and leaders from the NPRCs, has championed the effort to produce testing that is reliable and consistent across laboratories. Through multi-year efforts with shared proficiency samples, testing percent agreement has increased from as low as 67.1% for SRV testing in 2010 to 92.1% in 2019. The 2019 average agreement for the four basic SPF agents improved to >96% (86.5% BV, 98.9 SIV, 92.1 SRV, and 97.0 STLV). As new pathogens such as SARS coronavirus type 2 emerge, these steps can now be quickly replicated to develop and implement new assays that ensure rigor, reproducibly, and quality for NHP pathogen detection.


Sujets)
Virus T-lymphotrope simien de type 1 , Animaux , Primates , Normes de référence , Reproductibilité des résultats , Organismes exempts d'organismes pathogènes spécifiques
2.
Oxid Med Cell Longev ; 2022: 5397733, 2022.
Article Dans Anglais | MEDLINE | ID: covidwho-1635531

Résumé

The infection of coronavirus disease (COVID-19) seriously threatens human life. It is urgent to generate effective and safe specific antibodies (Abs) against the pathogenic elements of COVID-19. Mice were immunized with SARS-CoV-2 spike protein antigens: S ectodomain-1 (CoV, in short) mixed in Alum adjuvant for 2 times and boosted with CoV weekly for 6 times. A portion of mice were treated with Maotai liquor (MTL, in short) or/and heat stress (HS) together with CoV boosting. We observed that the anti-CoV Ab was successfully induced in mice that received the CoV/Alum immunization for 2 times. However, upon boosting with CoV, the CoV Ab production diminished progressively; spleen CoV Ab-producing plasma cell counts reduced, in which substantial CoV-specific Ab-producing plasma cells (sPC) were apoptotic. Apparent oxidative stress signs were observed in sPCs; the results were reproduced by exposing sPCs to CoV in the culture. The presence of MTL or/and HS prevented the CoV-induced oxidative stress in sPCs and promoted and stabilized the CoV Ab production in mice in re-exposure to CoV. In summary, CoV/Alum immunization can successfully induce CoV Ab production in mice that declines upon reexposure to CoV. Concurrent administration of MTL/HS stabilizes and promotes the CoV Ab production in mice.


Sujets)
Anticorps neutralisants/biosynthèse , Anticorps antiviraux/biosynthèse , Apoptose , COVID-19/immunologie , Plasmocytes/immunologie , SARS-CoV-2/physiologie , Superoxide dismutase-1/physiologie , Adjuvants immunologiques , Boissons alcooliques , Alun , Angiotensin-converting enzyme 2/physiologie , Animaux , Anticorps neutralisants/sang , Anticorps antiviraux/sang , COVID-19/enzymologie , Vaccins contre la COVID-19/immunologie , Réaction de choc thermique , Rappel de vaccin , Immunogénicité des vaccins , Kinase Janus-2/physiologie , Mâle , Souris , Souris de lignée C57BL , Stress oxydatif , Plasmocytes/effets des médicaments et des substances chimiques , Plasmocytes/anatomopathologie , Espèces réactives de l'oxygène/métabolisme , Facteur de transcription STAT-1/physiologie , Transduction du signal , Organismes exempts d'organismes pathogènes spécifiques , Glycoprotéine de spicule des coronavirus/immunologie , Vaccination
3.
Antiviral Res ; 197: 105232, 2022 01.
Article Dans Anglais | MEDLINE | ID: covidwho-1588314

Résumé

We report the in vitro antiviral activity of DZNep (3-Deazaneplanocin A; an inhibitor of S-adenosylmethionine-dependent methyltransferase) against SARS-CoV-2, besides demonstrating its protective efficacy against lethal infection of infectious bronchitis virus (IBV, a member of the Coronaviridae family). DZNep treatment resulted in reduced synthesis of SARS-CoV-2 RNA and proteins without affecting other steps of viral life cycle. We demonstrated that deposition of N6-methyl adenosine (m6A) in SARS-CoV-2 RNA in the infected cells recruits heterogeneous nuclear ribonucleoprotein A1 (hnRNPA1), an RNA binding protein which serves as a m6A reader. DZNep inhibited the recruitment of hnRNPA1 at m6A-modified SARS-CoV-2 RNA which eventually suppressed the synthesis of the viral genome. In addition, m6A-marked RNA and hnRNPA1 interaction was also shown to regulate early translation to replication switch of SARS-CoV-2 genome. Furthermore, abrogation of methylation by DZNep also resulted in defective synthesis of the 5' cap of viral RNA, thereby resulting in its failure to interact with eIF4E (a cap-binding protein), eventually leading to a decreased synthesis of viral proteins. Most importantly, DZNep-resistant mutants could not be observed upon long-term sequential passage of SARS-CoV-2 in cell culture. In summary, we report the novel role of methylation in the life cycle of SARS-CoV-2 and propose that targeting the methylome using DZNep could be of significant therapeutic value against SARS-CoV-2 infection.


Sujets)
Adénosine/analogues et dérivés , Génome viral/effets des médicaments et des substances chimiques , Methyltransferases/antagonistes et inhibiteurs , SARS-CoV-2/effets des médicaments et des substances chimiques , Adénosine/pharmacologie , Animaux , Embryon de poulet , Chlorocebus aethiops , Séquençage après immunoprécipitation de la chromatine , Méthylation de l'ADN/effets des médicaments et des substances chimiques , Méthylation de l'ADN/physiologie , Résistance virale aux médicaments/effets des médicaments et des substances chimiques , Génome viral/génétique , Ribonucléoprotéine nucléaire hétérogène A1/métabolisme , Humains , Dose létale 50 , Souris , Biosynthèse des protéines/effets des médicaments et des substances chimiques , ARN viral/effets des médicaments et des substances chimiques , ARN viral/métabolisme , Lapins , SARS-CoV-2/génétique , Organismes exempts d'organismes pathogènes spécifiques , Transcription génétique/effets des médicaments et des substances chimiques , Cellules Vero
4.
Viruses ; 13(8)2021 08 05.
Article Dans Anglais | MEDLINE | ID: covidwho-1341730

Résumé

The emergence and ensuing dominance of COVID-19 on the world stage has emphasized the urgency of efficient animal models for the development of therapeutics for and assessment of immune responses to SARS-CoV-2 infection. Shortcomings of current animal models for SARS-CoV-2 include limited lower respiratory disease, divergence from clinical COVID-19 disease, and requirements for host genetic modifications to permit infection. In this study, n = 12 specific-pathogen-free domestic cats were infected intratracheally with SARS-CoV-2 to evaluate clinical disease, histopathologic lesions, and viral infection kinetics at 4 and 8 days post-inoculation; n = 6 sham-inoculated cats served as controls. Intratracheal inoculation of SARS-CoV-2 produced a significant degree of clinical disease (lethargy, fever, dyspnea, and dry cough) consistent with that observed in the early exudative phase of COVID-19. Pulmonary lesions such as diffuse alveolar damage, hyaline membrane formation, fibrin deposition, and proteinaceous exudates were also observed with SARS-CoV-2 infection, replicating lesions identified in people hospitalized with ARDS from COVID-19. A significant correlation was observed between the degree of clinical disease identified in infected cats and pulmonary lesions. Viral loads and ACE2 expression were also quantified in nasal turbinates, distal trachea, lungs, and other organs. Results of this study validate a feline model for SARS-CoV-2 infection that results in clinical disease and histopathologic lesions consistent with acute COVID-19 in humans, thus encouraging its use for future translational studies.


Sujets)
COVID-19 , Chats , Modèles animaux de maladie humaine , SARS-CoV-2/physiologie , Angiotensin-converting enzyme 2/métabolisme , Animaux , COVID-19/anatomopathologie , COVID-19/physiopathologie , COVID-19/virologie , Femelle , Génome viral , Humains , Poumon/enzymologie , Poumon/anatomopathologie , Poumon/virologie , Noeuds lymphatiques/virologie , Mâle , ARN viral/analyse , SARS-CoV-2/génétique , Organismes exempts d'organismes pathogènes spécifiques , Trachée/enzymologie , Trachée/virologie , Cornets/enzymologie , Cornets/virologie
5.
Emerg Microbes Infect ; 10(1): 1555-1573, 2021 Dec.
Article Dans Anglais | MEDLINE | ID: covidwho-1324547

Résumé

To curb the pandemic of coronavirus disease 2019 (COVID-19) caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), multiple platforms have been employed toward a safe and highly effective vaccine. Here, we develop a novel cell-based vaccine candidate, namely K562-S, by utilizing human cell K562 as a cellular carrier to display Spike (S) protein of SARS-CoV-2 on the membrane. Analogous to the traditional inactivated vaccine, K562-S cells can be propagated to a large scale by culturing and completely lose their viability after exposure to X-ray irradiation or formalin. We in turn demonstrated high immunogenicity of formalin-inactivated K562-S vaccine in both mouse and non-human primates and its protective efficacy in mice. In mice, immunization with inactivated K562-S vaccines can elicit potent neutralizing antibody (nAb) responses persisting longer than 5 months. We consequently showed in a hACE2 mouse model of SARS-CoV-2 infection that a two-shot vaccination with adjuvanted K562-S rendered greater than 3 log reduction in viral lung load and concomitant ameliorated lung pathology. Of importance, the administration of the same regimen in non-human primates was able to induce a neutralizing antibody titer averaging three-fold higher relative to human convalescent serum. These results together support the promise of K562-based, S-protein-expressing vaccines as a novel vaccination approach against SARS-CoV-2. Importantly, with a powerful capacity to carry external genes for cell-based vectors, this platform could rapidly generate two- and multiple-valent vaccines by incorporating SARS-CoV-2 mutants, SARS-CoV, or MERS-CoV.


Sujets)
Anticorps neutralisants/sang , Anticorps antiviraux/sang , Vaccins contre la COVID-19/immunologie , COVID-19/prévention et contrôle , Immunogénicité des vaccins , SARS-CoV-2/immunologie , Angiotensin-converting enzyme 2/génétique , Angiotensin-converting enzyme 2/immunologie , Animaux , Animal génétiquement modifié , Vaccins contre la COVID-19/administration et posologie , Femelle , Cellules HEK293 , Humains , Cellules K562 , Macaca mulatta , Souris , Souris de lignée C57BL , Souris de lignée ICR , Primates , Organismes exempts d'organismes pathogènes spécifiques , Glycoprotéine de spicule des coronavirus/administration et posologie , Glycoprotéine de spicule des coronavirus/génétique , Glycoprotéine de spicule des coronavirus/immunologie , Vaccination/méthodes , Vaccins inactivés/administration et posologie , Vaccins inactivés/immunologie
7.
J Virol ; 95(17): e0066721, 2021 08 10.
Article Dans Anglais | MEDLINE | ID: covidwho-1274527

Résumé

Cellular immune responses play a key role in the control of viral infection. The nucleocapsid (N) protein of infectious bronchitis virus (IBV) is a major immunogenic protein that can induce protective immunity. To screen for potential T-cell epitopes on IBV N protein, 40 overlapping peptides covering the entirety of the N protein were designed and synthesized. Four T-cell epitope peptides were identified by gamma interferon (IFN-γ) enzyme-linked immunosorbent spot (ELISpot), intracellular cytokine staining, and carboxyfluorescein succinimidyl ester (CFSE) lymphocyte proliferation assays; among them, three peptides (N211-230, N271-290, and N381-400) were cytotoxic T lymphocyte (CTL) epitopes, and one peptide (N261-280) was a dual-specific T-cell epitope, which can be recognized by both CD8+ and CD4+ T cells. Multi-epitope gene transcription cassettes comprising four neutralizing epitope domains and four T-cell epitope peptides were synthesized and inserted into the genome of Newcastle disease virus strain La Sota between the P and M genes. Recombinant IBV multi-epitope vaccine candidate rLa Sota/SBNT was generated via reverse genetics, and its immune protection efficacy was evaluated in specific-pathogen-free chickens. Our results show that rLa Sota/SBNT induced IBV-specific neutralizing antibody and T-cell responses and provided significant protection against homologous and heterologous IBV challenge. Thus, the T-cell epitope peptides identified in this study could be good candidates for IBV vaccine development, and recombinant Newcastle disease virus-expressing IBV multi-epitope genes represent a safe and effective vaccine candidate for controlling infectious bronchitis. IMPORTANCE T-cell-mediated immune responses are critical for the elimination of IBV-infected cells. To screen conserved T-cell epitopes in the IBV N protein, 40 overlapping peptides covering the entirety of the N protein were designed and synthesized. By combining IFN-γ ELISpot, intracellular cytokine staining, and CFSE lymphocyte proliferation assays, we identified three CTL epitopes and one dual-specific T-cell epitope. The value of T-cell epitope peptides identified in the N protein was further verified by the design of an IBV multi-epitope vaccine. Results show that IBV multi-epitope vaccine candidate rLa Sota/SBNT provided cross protection against challenges with a QX-like or a TW-like IBV strain. So, T-cell-mediated immune responses play an important role in the control of viral infection, and conserved T-cell epitopes serve as promising candidates for use in multi-epitope vaccine construction. Our results provide a new perspective for the development of a safer and more effective IBV vaccine.


Sujets)
Infections à coronavirus/prévention et contrôle , Déterminants antigéniques des lymphocytes T/immunologie , Immunité cellulaire/immunologie , Virus de la bronchite infectieuse/immunologie , Protéines nucléocapside/immunologie , Maladies de la volaille/prévention et contrôle , Vaccins antiviraux/administration et posologie , Animaux , Poulets , Infections à coronavirus/immunologie , Infections à coronavirus/virologie , Immunité cellulaire/effets des médicaments et des substances chimiques , Maladies de la volaille/immunologie , Organismes exempts d'organismes pathogènes spécifiques , Lymphocytes T cytotoxiques/immunologie , Vaccins synthétiques/administration et posologie , Vaccins synthétiques/immunologie , Vaccins antiviraux/immunologie
8.
Vet Microbiol ; 259: 109155, 2021 Aug.
Article Dans Anglais | MEDLINE | ID: covidwho-1274453

Résumé

Turkey coronavirus (TCoV) can cause a highly contagious enteric disease in turkeys with severe economic losses in the global turkey industry. To date, no commercial vaccines are available for control of the disease. In the present study, we isolated a field strain (NC1743) of TCoV and evaluated its pathogenicity in specific-pathogen-free (SPF) turkey poults to establish a TCoV disease model. The results showed that the TCoV NC1743 isolate was pathogenic to turkey poults with a minimal infectious dose at 106 EID50/bird. About 50 % of one-day-old SPF turkeys infected with the virus's minimal infectious dose exhibited typical enteric disease signs and lesions from 6 days post-infection (dpi) to the end of the experiment (21 dpi). In contrast, fewer than 20 % of older turkeys (1- or 2-week-old) infected with the same amount of TCoV displayed enteric disease signs, which disappeared after 15-18 dpi. Although all infected turkeys, regardless of age, shed TCoV, the older turkeys shed less virus than the younger birds, and 50 % of the 2-week-old birds even cleared the virus at 21 dpi. Furthermore, the viral infection caused day-old turkeys more body-weight-gain reduction than older birds. The overall data demonstrated that the TCoV NC1743 isolate is a highly pathogenic strain and younger turkeys are more susceptible to TCoV infection than older birds. Thus, one-day-old turkeys infected with the minimal infectious dose of TCoV NC1743 could be used as a TCoV disease model to study the disease pathogenesis, and the TCoV NC1743 strain could be used as a challenge virus to evaluate a vaccine protective efficacy.


Sujets)
Infections à coronavirus/médecine vétérinaire , Coronavirus de la dinde/pathogénicité , Maladies de la volaille/prévention et contrôle , Dindons/virologie , Animaux , Anticorps antiviraux/sang , Infections à coronavirus/sang , Infections à coronavirus/prévention et contrôle , Infections à coronavirus/virologie , Coronavirus de la dinde/classification , Modèles animaux de maladie humaine , Maladies de la volaille/sang , Maladies de la volaille/virologie , Organismes exempts d'organismes pathogènes spécifiques
9.
Vet Microbiol ; 254: 109014, 2021 Mar.
Article Dans Anglais | MEDLINE | ID: covidwho-1107294

Résumé

TW-like infectious bronchitis virus (IBV) with high pathogenicity is becoming the predominant IBV type circulating in China. To develop vaccines against TW-like IBV strains and investigate the critical genes associated with their virulence, GD strain was attenuated by 140 serial passages in specific-pathogen-free embryonated eggs and the safety and efficacy of the attenuated GD strain (aGD) were examined. The genome sequences of GD and aGD were also compared and the effects of mutations in the S gene were observed. The results revealed that aGD strain showed no obvious pathogenicity with superior protective efficacy against TW-like and QX-like virulent IBV strains. The genomes of strains aGD and GD shared high similarity (99.87 %) and most of the mutations occurred in S gene. Recombinant IBV strain rGDaGD-S, in which the S gene was replaced with the corresponding regions from aGD, showed decreased pathogenicity compared with its parental strain. In conclusion, attenuated TW-like IBV strain aGD is a potential vaccine candidate and the S gene is responsible for its attenuation. Our research has laid the foundation for future exploration of the attenuating molecular mechanism of IBV.


Sujets)
Poulets/virologie , Virus de la bronchite infectieuse/génétique , Virus de la bronchite infectieuse/pathogénicité , Glycoprotéine de spicule des coronavirus/génétique , Vaccins antiviraux/génétique , Facteurs de virulence/génétique , Animaux , Embryon de poulet , Infections à coronavirus/prévention et contrôle , Virus de la bronchite infectieuse/immunologie , Maladies de la volaille/prévention et contrôle , Maladies de la volaille/virologie , Génétique inverse/méthodes , Passages en série , Organismes exempts d'organismes pathogènes spécifiques , Glycoprotéine de spicule des coronavirus/immunologie , Vaccins atténués/immunologie , Vaccins antiviraux/immunologie
10.
Science ; 373(6552)2021 07 16.
Article Dans Anglais | MEDLINE | ID: covidwho-1262378

Résumé

The COVID-19 pandemic has revealed the pronounced vulnerability of the elderly and chronically ill to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)-induced morbidity and mortality. Cellular senescence contributes to inflammation, multiple chronic diseases, and age-related dysfunction, but effects on responses to viral infection are unclear. Here, we demonstrate that senescent cells (SnCs) become hyper-inflammatory in response to pathogen-associated molecular patterns (PAMPs), including SARS-CoV-2 spike protein-1, increasing expression of viral entry proteins and reducing antiviral gene expression in non-SnCs through a paracrine mechanism. Old mice acutely infected with pathogens that included a SARS-CoV-2-related mouse ß-coronavirus experienced increased senescence and inflammation, with nearly 100% mortality. Targeting SnCs by using senolytic drugs before or after pathogen exposure significantly reduced mortality, cellular senescence, and inflammatory markers and increased antiviral antibodies. Thus, reducing the SnC burden in diseased or aged individuals should enhance resilience and reduce mortality after viral infection, including that of SARS-CoV-2.


Sujets)
Vieillissement , Vieillissement de la cellule/effets des médicaments et des substances chimiques , Infections à coronavirus/mortalité , Flavonols/usage thérapeutique , Molécules contenant des motifs associés aux pathogènes/métabolisme , Glycoprotéine de spicule des coronavirus/métabolisme , Animaux , COVID-19/immunologie , COVID-19/mortalité , Lignée cellulaire , Infections à coronavirus/immunologie , Dasatinib/pharmacologie , Dasatinib/usage thérapeutique , Femelle , Flavonols/pharmacologie , Régulation de l'expression des gènes , Humains , Lipopolysaccharides , Mâle , Souris , Souris de lignée C57BL , Virus de l'hépatite murine/immunologie , Quercétine/pharmacologie , Quercétine/usage thérapeutique , Récepteurs du coronavirus/génétique , Récepteurs du coronavirus/métabolisme , Organismes exempts d'organismes pathogènes spécifiques ,
11.
PLoS Pathog ; 17(4): e1009487, 2021 04.
Article Dans Anglais | MEDLINE | ID: covidwho-1231264

Résumé

Lipocalin 2 (LCN2) is a secreted glycoprotein with roles in multiple biological processes. It contributes to host defense by interference with bacterial iron uptake and exerts immunomodulatory functions in various diseases. Here, we aimed to characterize the function of LCN2 in lung macrophages and dendritic cells (DCs) using Lcn2-/- mice. Transcriptome analysis revealed strong LCN2-related effects in CD103+ DCs during homeostasis, with differential regulation of antigen processing and presentation and antiviral immunity pathways. We next validated the relevance of LCN2 in a mouse model of influenza infection, wherein LCN2 protected from excessive weight loss and improved survival. LCN2-deficiency was associated with enlarged mediastinal lymph nodes and increased lung T cell numbers, indicating a dysregulated immune response to influenza infection. Depletion of CD8+ T cells equalized weight loss between WT and Lcn2-/- mice, proving that LCN2 protects from excessive disease morbidity by dampening CD8+ T cell responses. In vivo T cell chimerism and in vitro T cell proliferation assays indicated that improved antigen processing by CD103+ DCs, rather than T cell intrinsic effects of LCN2, contribute to the exacerbated T cell response. Considering the antibacterial potential of LCN2 and that commensal microbes can modulate antiviral immune responses, we speculated that LCN2 might cause the observed influenza phenotype via the microbiome. Comparing the lung and gut microbiome of WT and Lcn2-/- mice by 16S rRNA gene sequencing, we observed profound effects of LCN2 on gut microbial composition. Interestingly, antibiotic treatment or co-housing of WT and Lcn2-/- mice prior to influenza infection equalized lung CD8+ T cell counts, suggesting that the LCN2-related effects are mediated by the microbiome. In summary, our results highlight a novel regulatory function of LCN2 in the modulation of antiviral immunity.


Sujets)
Grippe humaine/immunologie , Lipocaline-2/métabolisme , Microbiote/immunologie , Transcriptome , Animaux , Présentation d'antigène , Lymphocytes T CD8+/immunologie , Cellules dendritiques/immunologie , Cellules dendritiques/virologie , Femelle , Microbiome gastro-intestinal , Homéostasie , Humains , Immunité , Grippe humaine/virologie , Lipocaline-2/génétique , Poumon/immunologie , Poumon/virologie , Activation des lymphocytes , Macrophages/immunologie , Mâle , Souris , Souris de lignée C57BL , Organismes exempts d'organismes pathogènes spécifiques
12.
Avian Dis ; 64(2): 183-196, 2020 06.
Article Dans Anglais | MEDLINE | ID: covidwho-892407

Résumé

Nine infectious bronchitis virus (IBV) strains belonging to the GI-7 lineage were isolated between 2009 and 2017 in China. Phylogenetic analysis and comparisons of full-length sequences of the S1 gene suggested that the GI-7 lineage should be further classified as Taiwan (TW)-I and TW-II sublineages, which correspond to the previous TW-I and TW-II genotypes. The nine IBV strains were clustered in the TW-II sublineage. Further investigation revealed that viruses in the TW-I and TW-II were not only genetically but also antigenically different. Moreover, the TW-II sublineage contained various clades and recombinants. A recombinant was found to originate from recombination events between field strains (TW-II ck/CH/LJL/090608- and GI-19 ck/ CH/LDL/091022-like viruses) in which the recombination in the S1 subunit coding sequences had led to changes in antigenicity of the viruses. A more in-depth investigation demonstrated that TW-II viruses appear to have undergone a significant evolution following introduction in mainland China, which resulted in the viruses diverging into different clades. The viruses between the different clades in TW-II sublineage exhibited a significant change in genetic and antigenic characteristics. In addition, the five TW-II viruses selected on the basis of the results of S1 nucleotide sequence phylogenetic trees showed different pathogenicity to specific-pathogen-free chickens, although they could induce nephritis in the infected chickens and thus were identified as nephropathogenic strains.


Características genéticas, antigénicas y patógenas del virus de la bronquitis infecciosa GI-7/TW-II en China. Nueve cepas del virus de la bronquitis infecciosa (IBV) que pertenecen al linaje GI-7 se aislaron entre 2009 y 2017 en China. El análisis filogenético y las comparaciones de las secuencias completas del gene S1 sugirieron que el linaje GI-7 debería ser clasificado además como sublinajes TW-I y TW-II, que corresponden a los anteriores genotipos TW-T y TW-II. Las nueve cepas del virus de la bronquitis infecciosa se agruparon en el sublinaje TW-II. La investigación adicional reveló que los virus en TW-I y TW-II no solo eran tanto genéticamente como antigénicamente diferentes. Además, el sublinaje TW-II contenía varios clados y recombinantes. Se descubrió que un recombinante se originaba a partir de eventos de recombinación entre cepas de campo (virus similares a las cepas TW-II ck/CH/LJL/090608 y GI-19 ck/CH/LDL/091022) en los que la recombinación en las secuencias de codificación de la subunidad de S1 condujo a cambios en la antigenicidad de los virus. Una investigación más profunda demostró que los virus TW-II parecen haber experimentado una evolución significativa después de su introducción en China continental, lo que resultó en la divergencia de los virus en diferentes clados. Los virus entre los diferentes clados en el sublinaje TW-II exhibieron un cambio significativo en las características genéticas y antigénicas. Además, los cinco virus TW-II seleccionados con base en los resultados de los árboles filogenéticos de las secuencias de nucleótidos de S1 mostraron patogenicidad diferente en los pollos libres de patógenos específicos, aunque pudieron inducir nefritis en los pollos infectados y, por lo tanto, se identificaron como cepas nefropatógenas.


Sujets)
Poulets , Infections à coronavirus/médecine vétérinaire , Virus de la bronchite infectieuse , Maladies de la volaille/virologie , Glycoprotéine de spicule des coronavirus/génétique , Séquence d'acides aminés , Animaux , Antigènes viraux/génétique , Antigènes viraux/métabolisme , Chine , Infections à coronavirus/virologie , Virus de la bronchite infectieuse/génétique , Virus de la bronchite infectieuse/immunologie , Virus de la bronchite infectieuse/pathogénicité , Phylogenèse , Alignement de séquences , Organismes exempts d'organismes pathogènes spécifiques , Glycoprotéine de spicule des coronavirus/composition chimique , Glycoprotéine de spicule des coronavirus/métabolisme
13.
Poult Sci ; 99(4): 1928-1938, 2020 Apr.
Article Dans Anglais | MEDLINE | ID: covidwho-830463

Résumé

In this study, we isolated and identified 2 infectious bronchitis virus (IBV) strains from layer chickens soon after vaccination with the Massachusetts-Connecticut bivalent vaccine (Conn) and H120 and 4/91 booster vaccines in China in 2011. The results of cross-virus-neutralization tests and phylogenetic analysis of the S1 subunit of spike gene of these vaccine strains and other reference strains showed that strain LJL/110302 was of GI-19 lineage, whereas LLN/111169 was of the GI-1 lineage of the Conn serotype. Further comparative genomic analysis revealed that LLN/111169, an IBV strain with novel traits, originated from multiple recombination events (at least 3 recombination sites) between GI-19 and the Conn and 4/91 vaccine strains. LLN/111169 was pathogenic to specific pathogen-free (SPF) chickens. This is of prime importance because while IBV prevention measures worldwide are mainly dependent on modified live vaccine strains, our results showed that recombination between field and vaccine strains has produced a novel pathogenic IBV strain. In addition, LLN/111169 showed relatively broad tissue tropism (trachea, lungs, kidneys, and cecal tonsils) in infected SPF chickens. These results emphasize the importance of IBV surveillance in chicken flocks.


Sujets)
Poulets , Infections à coronavirus/médecine vétérinaire , Virus de la bronchite infectieuse/physiologie , Virus de la bronchite infectieuse/pathogénicité , Maladies de la volaille/virologie , Réplication virale , Animaux , Antigènes viraux/analyse , Chine , Infections à coronavirus/virologie , Virus de la bronchite infectieuse/génétique , Recombinaison génétique , Études rétrospectives , Sérogroupe , Organismes exempts d'organismes pathogènes spécifiques , Vaccins atténués/analyse , Vaccins antiviraux/analyse , Virulence
14.
J Virol Methods ; 279: 113855, 2020 05.
Article Dans Anglais | MEDLINE | ID: covidwho-827847

Résumé

Porcine epidemic diarrhea virus (PEDV) causes very high mortality in newborn piglets. The mucosal immune system in the gut must eliminate potential pathogens while maintaining a mutually beneficial relationship with the commensal microbiota. Antibodies derived from the secretory immunoglobulin A (SIgA) class, act as the first line of antigen-specific immunity in the gut by recognizing both pathogens and commensals. Therefore, the measurement of SIgA levels is an important index in evaluating PEDV infections and immune status. A simple and rapid method for the detection of PEDV-specific SIgA using an immunochromatographic test strip has been developed; incorporating a colloidal gold-labeled anti-SIgA secretory component (SC) mAb probe for the detection of anti-PEDV-specific SIgA in swine. On the strip, a gold-labeled anti-SIgA SC mAb was applied to a conjugate pad; purified PEDV particles and goat anti-mouse antibodies were blotted onto a nitrocellulose membrane to form the test and control lines, respectively. Results showed that the immunochromatographic test strip had high sensitivity and specificity. When compared with enzyme-linked immunosorbent assay, kappa value suggesting that the strip could be used to detect PEDV specific SIgA in colostrum samples. Furthermore, the strip assay is rapid and easy to perform with no requirement for professional-level skills or equipment. We found that the immunochromatographic test strip was a rapid, sensitive, and reliable method for the identification of PEDV specific SIgA, indicating its suitability for epidemiological surveillance as well as vaccine immunity when studying PEDV.


Sujets)
Anticorps antiviraux/analyse , Colostrum/immunologie , Dosage immunologique/méthodes , Immunoglobuline A sécrétoire/isolement et purification , Virus de la diarrhée porcine épidémique/immunologie , Animaux , Femelle , Or colloïdal , Bandelettes réactives , Sensibilité et spécificité , Organismes exempts d'organismes pathogènes spécifiques , Suidae , Maladies des porcs/diagnostic , Maladies des porcs/immunologie , Maladies des porcs/virologie
15.
Avian Pathol ; 49(1): 21-28, 2020 Feb.
Article Dans Anglais | MEDLINE | ID: covidwho-822641

Résumé

Since the emergence of low pathogenic avian influenza (LPAI) H9N2 viruses in Morocco in 2016, severe respiratory problems have been encountered in the field. Infectious bronchitis virus (IBV) is often detected together with H9N2, suggesting disease exacerbation in cases of co-infections. This hypothesis was therefore tested and confirmed in laboratory conditions using specific-pathogen-free chickens. Most common field vaccine programmes were then tested to compare their efficacies against these two co-infecting agents. IBV γCoV/chicken/Morocco/I38/2014 (Mor-IT02) and LPAI virus A/chicken/Morocco/SF1/2016 (Mor-H9N2) were thus inoculated to commercial chickens. We showed that vaccination with two heterologous IBV vaccines (H120 at day one and 4/91 at day 14 of age) reduced the severity of clinical signs as well as macroscopic lesions after simultaneous experimental challenge. In addition, LPAI H9N2 vaccination was more efficient at day 7 than at day 1 in limiting disease post simultaneous challenge.RESEARCH HIGHLIGHTS Simultaneous challenge with IBV and AIV H9N2 induced higher pathogenicity in SPF birds than inoculation with IBV or AIV H9N2 alone.Recommended vaccination programme in commercial broilers to counter Mor-IT02 IBV and LPAIV H9N2 simultaneous infections: IB live vaccine H120 (d1), AIV H9N2 inactivated vaccine (d7), IB live vaccine 4-91 (d14).


Sujets)
Poulets , Co-infection/médecine vétérinaire , Infections à coronavirus/médecine vétérinaire , Virus de la bronchite infectieuse , Sous-type H9N2 du virus de la grippe A , Grippe chez les oiseaux/virologie , Animaux , Anticorps antiviraux/sang , Embryon de poulet , Co-infection/prévention et contrôle , Co-infection/virologie , Infections à coronavirus/prévention et contrôle , Infections à coronavirus/virologie , Grippe chez les oiseaux/prévention et contrôle , Poumon/anatomopathologie , Maroc , Partie orale du pharynx/virologie , Projets pilotes , Maladies de la volaille/prévention et contrôle , Maladies de la volaille/virologie , ARN viral/composition chimique , ARN viral/isolement et purification , Réaction de polymérisation en chaine en temps réel/médecine vétérinaire , Organismes exempts d'organismes pathogènes spécifiques , Trachée/anatomopathologie , Vaccination/médecine vétérinaire , Vaccins atténués , Vaccins antiviraux , Excrétion virale
16.
Transbound Emerg Dis ; 67(2): 884-893, 2020 Mar.
Article Dans Anglais | MEDLINE | ID: covidwho-797115

Résumé

Infectious bronchitis virus (IBV) causes respiratory diseases in chickens and poses an economic threat to the poultry industry worldwide. Despite vaccine use, there have been field outbreaks of IBV in Taiwan. This study aimed to characterize the emerging IBV variants circulating in Taiwan. The analysis of the structural protein genes showed that these variants emerged through frequent recombination events among Taiwan strains, China strains, Japan strains and vaccine strains. Cross-neutralization tests revealed that two of the variants exhibited novel serotypes. Clinicopathological assessment showed that two of the variants caused high fatality rates of 67% and 20% in one-day-old SPF chicks, and all the variants possessed multiorgan tropisms, including trachea, proventriculus and urogenital tissues. Furthermore, the commercial live-attenuated Mass-type vaccine conferred poor protection against these variants. This study identified novel genotypes, serotypes and pathotypes of emerging IBV variants circulating in Taiwan. There is an urgent need for effective countermeasures against these variant strains.


Sujets)
Bronchite/médecine vétérinaire , Poulets/virologie , Infections à coronavirus/médecine vétérinaire , Épidémies de maladies/médecine vétérinaire , Virus de la bronchite infectieuse/génétique , Maladies de la volaille/virologie , Animaux , Bronchite/virologie , Infections à coronavirus/épidémiologie , Infections à coronavirus/virologie , Femelle , Variation génétique , Virus de la bronchite infectieuse/immunologie , Virus de la bronchite infectieuse/physiologie , Maladies de la volaille/épidémiologie , Proventricule/virologie , Organismes exempts d'organismes pathogènes spécifiques , Taïwan/épidémiologie , Trachée/virologie , Tropisme viral
17.
Microb Pathog ; 149: 104535, 2020 Dec.
Article Dans Anglais | MEDLINE | ID: covidwho-792800

Résumé

The immunopathogenesis of avian coronavirus, infectious bronchitis virus (IBV) Q1, was investigated in specific pathogen free chicks. Following infection, chicks exhibited respiratory clinical signs and reduced body weight. Oropharyngeal (OP) and cloacal (CL) swabs were collected at intervals and found to be RT-PCR positive, with a greater number of partial-S1 amino acid changes noted in CL swabs compared to OP swabs. In tissue samples, IBV viral load peaked 9 days post infection (dpi) in the trachea and kidneys, and 14 dpi in the proventriculus. At 28 dpi, ELISA data showed that 63% of infected chicks seroconverted. There was significantly higher mRNA up-regulation of IFN-α, TLR3, MDA5, LITAF, IL-1ß and IL-6 in the trachea compared to the kidneys. Findings presented here demonstrate that this Q1 isolate induces greater lesions and host innate immune responses in chickens' tracheas compared to the kidneys.


Sujets)
Poulets/immunologie , Infections à coronavirus/médecine vétérinaire , Virus de la bronchite infectieuse/immunologie , Maladies de la volaille/immunologie , Maladies de la volaille/virologie , Animaux , Anticorps antiviraux/sang , Poids , Infections à coronavirus/immunologie , Infections à coronavirus/anatomopathologie , Infections à coronavirus/virologie , Cytokines/sang , Cytokines/génétique , Cytokines/métabolisme , Expression des gènes , Immunité innée , Virus de la bronchite infectieuse/génétique , Virus de la bronchite infectieuse/isolement et purification , Maladies de la volaille/anatomopathologie , Organismes exempts d'organismes pathogènes spécifiques , Charge virale
18.
J Infect Dis ; 222(4): 551-555, 2020 07 23.
Article Dans Anglais | MEDLINE | ID: covidwho-704462

Résumé

We simulated 3 transmission modes, including close-contact, respiratory droplets and aerosol routes, in the laboratory. Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) can be highly transmitted among naive human angiotensin-converting enzyme 2 (hACE2) mice via close contact because 7 of 13 naive hACE2 mice were SARS-CoV-2 antibody seropositive 14 days after being introduced into the same cage with 3 infected-hACE2 mice. For respiratory droplets, SARS-CoV-2 antibodies from 3 of 10 naive hACE2 mice showed seropositivity 14 days after introduction into the same cage with 3 infected-hACE2 mice, separated by grids. In addition, hACE2 mice cannot be experimentally infected via aerosol inoculation until continued up to 25 minutes with high viral concentrations.


Sujets)
Betacoronavirus , Infections à coronavirus/transmission , Pneumopathie virale/transmission , Aérosols , Canal anal/virologie , Angiotensin-converting enzyme 2 , Animaux , Anticorps antiviraux/sang , Betacoronavirus/génétique , Betacoronavirus/immunologie , Betacoronavirus/isolement et purification , COVID-19 , Chlorocebus aethiops , Femelle , Humains , Immunoglobuline G/sang , Poumon/anatomopathologie , Poumon/virologie , Mâle , Souris , Souris transgéniques , Pandémies , Peptidyl-Dipeptidase A/génétique , Pharynx/virologie , ARN viral/isolement et purification , Appareil respiratoire/virologie , Risque , SARS-CoV-2 , Organismes exempts d'organismes pathogènes spécifiques , Facteurs temps , Cellules Vero , Charge virale , Perte de poids
19.
Cell ; 182(3): 722-733.e11, 2020 08 06.
Article Dans Anglais | MEDLINE | ID: covidwho-628738

Résumé

Vaccines are urgently needed to control the ongoing pandemic COVID-19 and previously emerging MERS/SARS caused by coronavirus (CoV) infections. The CoV spike receptor-binding domain (RBD) is an attractive vaccine target but is undermined by limited immunogenicity. We describe a dimeric form of MERS-CoV RBD that overcomes this limitation. The RBD-dimer significantly increased neutralizing antibody (NAb) titers compared to conventional monomeric form and protected mice against MERS-CoV infection. Crystal structure showed RBD-dimer fully exposed dual receptor-binding motifs, the major target for NAbs. Structure-guided design further yielded a stable version of RBD-dimer as a tandem repeat single-chain (RBD-sc-dimer) which retained the vaccine potency. We generalized this strategy to design vaccines against COVID-19 and SARS, achieving 10- to 100-fold enhancement of NAb titers. RBD-sc-dimers in pilot scale production yielded high yields, supporting their scalability for further clinical development. The framework of immunogen design can be universally applied to other beta-CoV vaccines to counter emerging threats.


Sujets)
Betacoronavirus/immunologie , Infections à coronavirus/prévention et contrôle , Coronavirus du syndrome respiratoire du Moyen-Orient/immunologie , Pandémies/prévention et contrôle , Pneumopathie virale/prévention et contrôle , Virus du SRAS/immunologie , Conception universelle , Angiotensin-converting enzyme 2 , Animaux , Anticorps neutralisants/immunologie , Anticorps antiviraux/immunologie , Betacoronavirus/composition chimique , COVID-19 , Vaccins contre la COVID-19 , Lignée cellulaire tumorale , Chlorocebus aethiops , Infections à coronavirus/virologie , Cellules HEK293 , Humains , Souris , Souris de lignée BALB C , Coronavirus du syndrome respiratoire du Moyen-Orient/composition chimique , Peptidyl-Dipeptidase A/génétique , Peptidyl-Dipeptidase A/métabolisme , Pneumopathie virale/virologie , Liaison aux protéines , Motifs et domaines d'intéraction protéique/immunologie , Récepteurs viraux/métabolisme , Virus du SRAS/composition chimique , SARS-CoV-2 , Cellules Sf9 , Organismes exempts d'organismes pathogènes spécifiques , Spodoptera , Transfection , Vaccination/méthodes , Cellules Vero , Vaccins antiviraux
20.
Cell ; 182(3): 734-743.e5, 2020 08 06.
Article Dans Anglais | MEDLINE | ID: covidwho-592236

Résumé

COVID-19, caused by SARS-CoV-2, is a virulent pneumonia, with >4,000,000 confirmed cases worldwide and >290,000 deaths as of May 15, 2020. It is critical that vaccines and therapeutics be developed very rapidly. Mice, the ideal animal for assessing such interventions, are resistant to SARS-CoV-2. Here, we overcome this difficulty by exogenous delivery of human ACE2 with a replication-deficient adenovirus (Ad5-hACE2). Ad5-hACE2-sensitized mice developed pneumonia characterized by weight loss, severe pulmonary pathology, and high-titer virus replication in lungs. Type I interferon, T cells, and, most importantly, signal transducer and activator of transcription 1 (STAT1) are critical for virus clearance and disease resolution in these mice. Ad5-hACE2-transduced mice enabled rapid assessments of a vaccine candidate, of human convalescent plasma, and of two antiviral therapies (poly I:C and remdesivir). In summary, we describe a murine model of broad and immediate utility to investigate COVID-19 pathogenesis and to evaluate new therapies and vaccines.


Sujets)
Betacoronavirus/immunologie , Infections à coronavirus/anatomopathologie , Infections à coronavirus/prévention et contrôle , Modèles animaux de maladie humaine , Pandémies/prévention et contrôle , Pneumopathie virale/anatomopathologie , Pneumopathie virale/prévention et contrôle , Vaccination , Angiotensin-converting enzyme 2 , Animaux , COVID-19 , Chlorocebus aethiops , Infections à coronavirus/virologie , Évaluation préclinique de médicament/méthodes , Femelle , Humains , Interféron gamma/génétique , Interféron gamma/métabolisme , Poumon/anatomopathologie , Poumon/virologie , Mâle , Souris , Souris de lignée BALB C , Souris de lignée C57BL , Souris knockout , Peptidyl-Dipeptidase A/génétique , Peptidyl-Dipeptidase A/métabolisme , Pneumopathie virale/virologie , Récepteur à l'interféron alpha-bêta/génétique , Récepteur à l'interféron alpha-bêta/métabolisme , SARS-CoV-2 , Facteur de transcription STAT-1/génétique , Facteur de transcription STAT-1/métabolisme , Organismes exempts d'organismes pathogènes spécifiques , Transduction génétique , Cellules Vero , Charge virale , Réplication virale
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